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- 11:52, 25 February 2020 (diff | hist) . . (-27) . . Lessons Learned from Quantitative Dynamical Modeling in Systems Biology (→Lessons Learned from Quantitative Dynamical Modeling in Systems Biology)
- 11:51, 25 February 2020 (diff | hist) . . (+86) . . Parameter estimation with bio-inspired meta-heuristic optimization: modeling the dynamics of endocytosis (current)
- 11:51, 25 February 2020 (diff | hist) . . (+8) . . Literature Studies (→Preprocessing high-throughput data)
- 11:50, 25 February 2020 (diff | hist) . . (-141) . . Accounting for the Multiple Natures of Missing Values in Label-Free Quantitative Proteomics Data Sets to Compare Imputation Strategies (→Accounting for the Multiple Natures of Missing Values in Label-Free Quantitative Proteomics Data Sets to Compare Imputation Strategies) (current)
- 11:49, 25 February 2020 (diff | hist) . . (-1) . . Review, evaluation, and discussion of the challenges of missing value imputation for mass spectrometry-based label-free global proteomics. (→Citation) (current)
- 11:49, 25 February 2020 (diff | hist) . . (-14) . . Review, evaluation, and discussion of the challenges of missing value imputation for mass spectrometry-based label-free global proteomics. (→General information)
- 11:48, 25 February 2020 (diff | hist) . . (-226) . . Literature Studies (→Preprocessing high-throughput data)
- 11:48, 25 February 2020 (diff | hist) . . (+26) . . Recursive partitioning for missing data imputation in the presence of interaction effects. (→Citation) (current)
- 11:47, 25 February 2020 (diff | hist) . . (-99) . . Comparing gene set analysis methods on single-nucleotide polymorphism data from Genetic Analysis Workshop 16 (→Comparing gene set analysis methods on single-nucleotide polymorphism data from Genetic Analysis Workshop 16)
- 11:45, 25 February 2020 (diff | hist) . . (+1) . . Hierarchical optimization for the efficient parametrization of ODE models (→Further comments and aspects)
- 11:45, 25 February 2020 (diff | hist) . . (+16) . . Missing values in mass spectrometry based metabolomics: an undervalued step in the data processing pipeline (→Citation) (current)
- 11:45, 25 February 2020 (diff | hist) . . (-50) . . Hierarchical optimization for the efficient parametrization of ODE models (→Further comments and aspects)
- 11:44, 25 February 2020 (diff | hist) . . (+7) . . Missing values in mass spectrometry based metabolomics: an undervalued step in the data processing pipeline (→Citation)
- 11:44, 25 February 2020 (diff | hist) . . (+15) . . Literature Studies (→Preprocessing high-throughput data)
- 11:44, 25 February 2020 (diff | hist) . . (+293) . . m Hierarchical optimization for the efficient parametrization of ODE models (→Further comments and aspects)
- 11:43, 25 February 2020 (diff | hist) . . (+19) . . Literature Studies (→Preprocessing high-throughput data)
- 11:42, 25 February 2020 (diff | hist) . . (+46) . . Literature Studies (→Preprocessing high-throughput data)
- 11:42, 25 February 2020 (diff | hist) . . (+5) . . Literature Studies (→Preprocessing high-throughput data)
- 11:41, 25 February 2020 (diff | hist) . . (+106) . . Literature Studies (→Preprocessing high-throughput data)
- 11:41, 25 February 2020 (diff | hist) . . (-2) . . Which missing value imputation method to use in expression profiles: a comparative study and two selection schemes (→Citation) (current)
- 11:39, 25 February 2020 (diff | hist) . . (-2) . . Gene set analysis methods: a systematic comparison (→Citation)
- 11:39, 25 February 2020 (diff | hist) . . (-2) . . Performance of objective functions and optimization procedures for parameter estimation in system biology models
- 11:39, 25 February 2020 (diff | hist) . . (+111) . . Literature Studies (→Preprocessing high-throughput data)
- 11:39, 25 February 2020 (diff | hist) . . (-40) . . Gene set analysis methods: a systematic comparison (→Gene set analysis methods: a systematic comparison)
- 11:38, 25 February 2020 (diff | hist) . . (-65) . . MethCP: Differentially Methylated Region Detection with Change Point Models (bioRxiv) (→MethCP: Differentially Methylated Region Detection with Change Point Models) (current)
- 11:38, 25 February 2020 (diff | hist) . . (0) . . Performance of objective functions and optimization procedures for parameter estimation in system biology models
- 11:38, 25 February 2020 (diff | hist) . . (-132) . . DMRcaller: a versatile R/Bioconductor package for detection and visualization of differentially methylated regions in CpG and non-CpG contexts (→DMRcaller: a versatile R/Bioconductor package for detection and visualization of differentially methylated regions in CpG and non-CpG contexts) (current)
- 11:38, 25 February 2020 (diff | hist) . . (-17) . . Literature Studies (→Preprocessing high-throughput data)
- 11:38, 25 February 2020 (diff | hist) . . (-129) . . Defiant: (DMRs: easy, fast, identification and ANnoTation) identifies differentially Methylated regions from iron-deficient rat hippocampus (current)
- 11:37, 25 February 2020 (diff | hist) . . (+17) . . Literature Studies (→Preprocessing high-throughput data)
- 11:37, 25 February 2020 (diff | hist) . . (+1,485) . . N Missing values in mass spectrometry based metabolomics: an undervalued step in the data processing pipeline (Created page with " === Citation === Hrydziuszko O., Viant M.R. Missing values in mass spectrometry based metabolomics: an undervalued step in the data processing pipeline (2012). Metabolomics....")
- 11:37, 25 February 2020 (diff | hist) . . (-80) . . DMRfinder: efficiently identifying differentially methylated regions from MethylC-seq data (→DMRfinder: efficiently identifying differentially methylated regions from MethylC-seq data) (current)
- 11:37, 25 February 2020 (diff | hist) . . (-2) . . Optimization and profile calculation of ODE models using second order adjoint sensitivity analysis
- 11:37, 25 February 2020 (diff | hist) . . (-137) . . m Hierarchical optimization for the efficient parametrization of ODE models (→General Information)
- 11:37, 25 February 2020 (diff | hist) . . (0) . . Hybrid optimization method with general switching strategy for parameter estimation (→Paper name)
- 11:37, 25 February 2020 (diff | hist) . . (+1) . . Optimization and profile calculation of ODE models using second order adjoint sensitivity analysis
- 11:37, 25 February 2020 (diff | hist) . . (-1) . . Guidelines for Summarizing a Literature Study (→Template code) (current)
- 11:35, 25 February 2020 (diff | hist) . . (+12) . . m Hierarchical optimization for the efficient parametrization of ODE models (→Further comments and aspects)
- 11:35, 25 February 2020 (diff | hist) . . (+1) . . Performance of objective functions and optimization procedures for parameter estimation in system biology models
- 11:34, 25 February 2020 (diff | hist) . . (+222) . . Literature Studies (→Imputation methods for missing values)
- 11:34, 25 February 2020 (diff | hist) . . (+184) . . Hierarchical optimization for the efficient parametrization of ODE models (→Further comments and aspects)
- 11:34, 25 February 2020 (diff | hist) . . (-9) . . Literature Studies
- 11:33, 25 February 2020 (diff | hist) . . (+9) . . Literature Studies
- 11:31, 25 February 2020 (diff | hist) . . (+4) . . Literature Studies (→ODE-based Modelling)
- 11:27, 25 February 2020 (diff | hist) . . (-11) . . Literature Studies (→Preprocessing high-throughput data)
- 11:25, 25 February 2020 (diff | hist) . . (+11) . . Literature Studies (→Preprocessing high-throughput data)
- 11:21, 25 February 2020 (diff | hist) . . (0) . . m Hierarchical optimization for the efficient parametrization of ODE models (→Convergence of optimizer)
- 11:03, 25 February 2020 (diff | hist) . . (0) . . A comparison of methods for quantifying prediction uncertainty in systems biology (→Paper name)
- 11:02, 25 February 2020 (diff | hist) . . (+1,570) . . N Which missing value imputation method to use in expression profiles: a comparative study and two selection schemes (Created page with " === Citation === G. N., Shaffer, J. R., Blakesley, R. E., Lotz, M. J., and Tseng, G. C. (2008). Which missing value imputation method to use in expression profiles: a compara...")
- 11:01, 25 February 2020 (diff | hist) . . (-123) . . Performance of objective functions and optimization procedures for parameter estimation in system biology models
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