Catalyst: Fast and flexible modeling of reaction networks

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Citation

Torkel E. Loman, Yingbo Ma, Vasily Ilin, Shashi Gowda, Niklas Korsbo, Nikhil Yewale, Chris Rackauckas, Samuel A. Isaacson, Catalyst: Fast and flexible modeling of reaction networks, 2023, Plos Computational Biology,

[1]

Summary

Julia-based simulation tool termed Catalyst

Study outcomes

They compare simulation runtimes with other tools.

Outcome O1

It is claimed that Catalyst is around one order of magnitude faster

Study design and evidence level

General aspects

At a quick glance, this benchmarking seems to very naive. Was integration accuracy considered?

Design for Outcome O1

• ...

Further comments and aspects

I only had a very quick look.