Comparing gene set analysis methods on single-nucleotide polymorphism data from Genetic Analysis Workshop 16

1 Comparing gene set analysis methods on single-nucleotide polymorphism data from Genetic Analysis Workshop 16

Tintle, N. L., Borchers, B., Brown, M., & Bekmetjev, A., Comparing gene set analysis methods on single-nucleotide polymorphism data from Genetic Analysis Workshop 16, 2009, BMC proceedings, 3(S7), 96.

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1.1 Summary

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1.2 Study outcomes

List the paper results concerning method comparison and benchmarking:

1.2.1 Outcome O1

The performance of ...

Outcome O1 is presented as Figure X in the original publication.

1.2.2 Outcome O2

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Outcome O2 is presented as Figure X in the original publication.

1.2.3 Outcome On

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Outcome On is presented as Figure X in the original publication.

1.2.4 Further outcomes

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1.3 Study design and evidence level

1.3.1 General aspects

You can describe general design aspects here. The study designs for describing specific outcomes are listed in the following subsections:

1.3.2 Design for Outcome O1

• The outcome was generated for ...
• Configuration parameters were chosen ...
• ...

1.3.3 Design for Outcome O2

• The outcome was generated for ...
• Configuration parameters were chosen ...
• ...

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1.3.4 Design for Outcome O

• The outcome was generated for ...
• Configuration parameters were chosen ...
• ...

1.5 References

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